Datasets

10UKBEC

This category contains 10 Illumina microarray-based gene-expression profiling networks from brain tissue.

Network Description Network Description
CRBL Cerebellum tissue. PUTM Putamen tissue.
FCTX Frontal cortex tissue. SNIG Substantia nigra tissue.
HIPP Hippocampus tissue. TCTX Temporal cortex tissue.
MEDU Medulla tissue. THAL Thalamus tissue.
OCTX Occipital cortex tissue. WHMT Intralobular white matter tissue.

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CoExpGTExV7

This category contains 47 co-expression networks in control tissue, including 13 brain areas. The expression data was obtained from the 7th version of the Genotype-Tissue Expression (GTEx) project.


CoExpROSMAP

This category is composed of 4 networks (all samples, not AD, probable AD and AD) generated from frontal cortex samples obtained from The Religious Orders Study and Memory and Aging Project (ROSMAP) Study.

Network Description
ad This network was generated using samples from participants diagnosed with Alzheimer's Disease (AD).
all samples This network was generated using all samples included in the study.
not AD This network was generated using samples from participants not diagnosed with Alzheimer's Disease (AD).
probable AD This network was generated using samples from participants categorized with a high probability of Alzheimer's Disease (AD) diagnosis.

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gtexv6

This category contains 47 co-expression networks in control tissue, including 13 brain areas. The expression data was obtained from the 6th version of the Genotype-Tissue Expression (GTEx) project.

Network Description Network Description Network Description
AdiposeSub Adipose Subcutaneous tissue. AdiposeVisceral Adipose Visceral (Omentum) tissue. AdrenalGland Adrenal Gland tissue.
Amygdala Amygdala tissue. AntCingCortex Brain - Anterior Cingulate Cortex tissue. ArteryAorta Artery Aorta tissue.
ArteryCoronary Artery Coronary tissue. ArteryTibial Artery Tibial tissue. Breast Breast - Mamamry tissue.
Caudate Brain - Caudate (basal ganglia) tissue. CellsFirbroblasts Cells - Cultured fibroblasts tissue. CellsLymphocytes Cells - EBV-transformed lymphocytes tissue.
Cerebellum Brain - Cerebellum tissue. CerebHemisphere Brain - Cerebellar Hemisphere tissue. ColonSigmoid Colon - Sigmoid tissue.
ColonTransverse Colon - Transverse tissue. Cortex Brain - Cortex tissue. EsophGastJunction Esophagus - Gastroesophageal Junction tissue.
EsophMucosa Esophagus - Mucosa tissue. EsophMuscularis Esophagus - Muscularis tissue. FCortex Brain - Frontal Cortex (BA9) tissue.
HeartAtrialApp Heart - Atrial Appendage tissue. HeartLeftVent Heart - Left Ventricle tissue. Hippocampus Brain - Hippocampus tissue.
Hypothalamus Brain - Hypothalamus tissue. Liver Liver tissue. Lung Lung tissue.
MuscleSkeletal Muscle - Skeletal tissue. NerveTibial Nerve - Tibial tissue. NucAccumbens Brain - Nucleus accumbens (basal ganglia) tissue.
Ovary Ovary tissue. Pancreas Pancreas tissue. Pituitary Pituitary tissue.
Prostate Prostate tissue. Putamen Brain - Putamen (basal ganglia) tissue. SkinLowerLeg Skin - Sun Exposed (Lower leg) tissue.
SkinSuprapubic Skin - Not Sun Exposed (Suprapubic) tissue. SmallIntestine Small Intestine - Terminal Ileum tissue. Spinalcord Brain - Spinal Cord (cervical c-1) tissue.
Spleen Spleen tissue. Stomach Stomach tissue. Substantianigra Brain - Substantia nigra tissue.
Testis Testis tissue. Thyroid Thyroid tissue. Uterus Uterus tissue.
Vagina Vagina tissue. WholeBlood Whole Blood tissue.

nabec

This category contains a gene co-expression network from RNA-seq control samples from Cortex tissue.